| 08 May 2016 | First Round | Clifton v Friends United | Manchester Road, Clifton | Results |
| 08 May 2016 | First Round | Worsley v Unsworth | Walkden Road, Worsley | Results |
| 15 May 2016 | First Round | Bamford Fieldhouse v Astley and Tyldesley | Hollin Lane, Bamford | Results |
| 15 May 2016 | First Round | Blackley v Newton Heath | Tweedle Hill Road, Blackley | Results |
| 15 May 2016 | First Round | Bolton Indians v Fothergill and Harvey | Hacken Lane, Darcy Lever | Results |
| 15 May 2016 | First Round | Brooksbottom v Glossop | Rowlands Road, Summerseat | Results |
| 15 May 2016 | First Round | Denton v Woodhouses | Egerton Street, Denton | Results |
| 15 May 2016 | First Round | Droylsden v Edgworth | Oakfield, Droylsden | Results |
| 15 May 2016 | First Round | Elton Vale Sports v Egerton | Elton Vale Sports Club, Bury | Results |
| 15 May 2016 | First Round | Failsworth Macedonia v Bolton | Argyll Park, Failsworth | Results |
| 15 May 2016 | First Round | Flowery Field v Oldham West | Flowery Field, Hyde | Results |
| 15 May 2016 | First Round | Friends Sporting Club v Springhead | The Racecourse Ground, Alexandra Park | Results |
| 15 May 2016 | First Round | Heywood v Elton | The Crimble Ground, Heywood | Results |
| 15 May 2016 | First Round | Littleborough Lakeside v Tottington St John's | Deep Lane, Littleborough | Results |
| 15 May 2016 | First Round | Prestwich v Radcliffe | The Heys, Prestwich | Results |
| 15 May 2016 | First Round | South West Manchester v Bury | Ellesmere Road, Chorlton-cum-Hardy | Results |
| 15 May 2016 | First Round | Stand v Wythenshawe | Hamilton Road, Whitefield | Results |
| 15 May 2016 | First Round | Stretford v Walshaw | The Boundary, Stretford | Results |
| 15 May 2016 | First Round | Thornham v Westleigh | Rochdale Road, Slattocks | Results |
| 15 May 2016 | First Round | Westleigh Methodists v Edenfield | Knowles Park, Leigh | Results |
| 15 May 2016 | First Round | Whalley Range v Ashton Ladysmith | Kingsbrook Road, Whalley Range | Results |
| 15 May 2016 | First Round | Winton v Greenmount | Alder Forest Avenue, Winton | Results |
| 15 May 2016 | First Round | Woodbank v Roe Green | The Kenyons, Bury | Results |
| 22 May 2016 | Second Round | Bamford Fieldhouse v Littleborough Lakeside | Hollin Lane, Bamford | Results |
| 29 May 2016 | Second Round | Blackley v Flixton | Tweedle Hill Road, Blackley | Results |
| 29 May 2016 | Second Round | Clifton v Woodbank | Manchester Road, Clifton | Results |
| 29 May 2016 | Second Round | Denton St Lawrence v Bolton Indians | Sycamore Park, Denton | Results |
| 29 May 2016 | Second Round | East Lancashire Paper Mill v Denton West | Croft Lane, Radcliffe | Results |
| 29 May 2016 | Second Round | Egerton v Greenmount | Blackburn Road, Egerton | Results |
| 29 May 2016 | Second Round | Flowery Field v Swinton Moorside | Flowery Field, Hyde | Results |
| 29 May 2016 | Second Round | Glossop v Edgworth | North Road, Glossop | Results |
| 29 May 2016 | Second Round | Heywood v Dukinfield | The Crimble Ground, Heywood | Results |
| 29 May 2016 | Second Round | Prestwich v Irlam | The Heys, Prestwich | Results |
| 29 May 2016 | Second Round | Rochdale Catholic Club v Stand | St Cuthberts School Playing Fields, Rochdale | Results |
| 29 May 2016 | Second Round | South West Manchester v Deane and Derby | Ellesmere Road, Chorlton-cum-Hardy | Results |
| 29 May 2016 | Second Round | Thornham v Friends Sporting Club | Rochdale Road, Slattocks | Results |
| 29 May 2016 | Second Round | Walshaw v Failsworth Macedonia | Sycamore Road, Tottington | Results |
| 29 May 2016 | Second Round | Worsley v Edenfield | Walkden Road, Worsley | Results |
| 05 Jun 2016 | Second Round | Whalley Range v Woodhouses | Kingsbrook Road, Whalley Range | Results |
| 26 Jun 2016 | Third Round | Clifton v Edenfield | Manchester Road, Clifton | Results |
| 26 Jun 2016 | Third Round | Denton St Lawrence v Stand | Sycamore Park, Denton | Results |
| 26 Jun 2016 | Third Round | Glossop v Egerton | North Road, Glossop | Results |
| 26 Jun 2016 | Third Round | Heywood v Prestwich | The Crimble Ground, Heywood | Results |
| 26 Jun 2016 | Third Round | South West Manchester v Walshaw | Ellesmere Road, Chorlton-cum-Hardy | Results |
| 26 Jun 2016 | Third Round | Thornham v Bamford Fieldhouse | Rochdale Road, Slattocks | Results |
| 26 Jun 2016 | Third Round | Whalley Range v Flowery Field | Kingsbrook Road, Whalley Range | Results |
| 10 Jul 2016 | Third Round | Denton West v Flixton | Windsor Park, Denton | Results |
| 17 Jul 2016 | Quarter-Final | Bamford Fieldhouse v Whalley Range | Hollin Lane, Bamford | Results |
| 17 Jul 2016 | Quarter-Final | Flixton v Walshaw | Lawrence Road, Flixton | Results |
| 17 Jul 2016 | Quarter-Final | Glossop v Clifton | North Road, Glossop | Results |
| 17 Jul 2016 | Quarter-Final | Heywood v Denton St Lawrence | The Crimble Ground, Heywood | Results |
| 31 Jul 2016 | Semi-Final | Denton St Lawrence v Walshaw | Sycamore Park, Denton | Results |
| 07 Aug 2016 | Semi-Final | Bamford Fieldhouse v Clifton | Hollin Lane, Bamford | Results |
| 21 Aug 2016 | Final | Bamford Fieldhouse v Walshaw | Manchester Road, Clifton | Results |
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